CDS

Accession Number TCMCG051C41834
gbkey CDS
Protein Id XP_002321594.2
Location join(10026684..10026839,10027047..10027163,10027269..10027277)
Gene LOC7457733
GeneID 7457733
Organism Populus trichocarpa

Protein

Length 93aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002321558.3
Definition exosome complex component rrp40 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category J
Description nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
KEGG_TC 2.A.29.23
KEGG_Module M00391        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K03681        [VIEW IN KEGG]
ko:K14684        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000175        [VIEW IN EMBL-EBI]
GO:0000176        [VIEW IN EMBL-EBI]
GO:0000177        [VIEW IN EMBL-EBI]
GO:0000178        [VIEW IN EMBL-EBI]
GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000459        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000467        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001775        [VIEW IN EMBL-EBI]
GO:0002164        [VIEW IN EMBL-EBI]
GO:0002200        [VIEW IN EMBL-EBI]
GO:0002204        [VIEW IN EMBL-EBI]
GO:0002208        [VIEW IN EMBL-EBI]
GO:0002250        [VIEW IN EMBL-EBI]
GO:0002252        [VIEW IN EMBL-EBI]
GO:0002263        [VIEW IN EMBL-EBI]
GO:0002285        [VIEW IN EMBL-EBI]
GO:0002312        [VIEW IN EMBL-EBI]
GO:0002366        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002377        [VIEW IN EMBL-EBI]
GO:0002381        [VIEW IN EMBL-EBI]
GO:0002440        [VIEW IN EMBL-EBI]
GO:0002443        [VIEW IN EMBL-EBI]
GO:0002449        [VIEW IN EMBL-EBI]
GO:0002460        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0002562        [VIEW IN EMBL-EBI]
GO:0002637        [VIEW IN EMBL-EBI]
GO:0002639        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0002694        [VIEW IN EMBL-EBI]
GO:0002696        [VIEW IN EMBL-EBI]
GO:0002697        [VIEW IN EMBL-EBI]
GO:0002699        [VIEW IN EMBL-EBI]
GO:0002700        [VIEW IN EMBL-EBI]
GO:0002702        [VIEW IN EMBL-EBI]
GO:0002703        [VIEW IN EMBL-EBI]
GO:0002705        [VIEW IN EMBL-EBI]
GO:0002706        [VIEW IN EMBL-EBI]
GO:0002708        [VIEW IN EMBL-EBI]
GO:0002712        [VIEW IN EMBL-EBI]
GO:0002714        [VIEW IN EMBL-EBI]
GO:0002819        [VIEW IN EMBL-EBI]
GO:0002821        [VIEW IN EMBL-EBI]
GO:0002822        [VIEW IN EMBL-EBI]
GO:0002824        [VIEW IN EMBL-EBI]
GO:0002889        [VIEW IN EMBL-EBI]
GO:0002891        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004532        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008298        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016064        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016074        [VIEW IN EMBL-EBI]
GO:0016075        [VIEW IN EMBL-EBI]
GO:0016078        [VIEW IN EMBL-EBI]
GO:0016180        [VIEW IN EMBL-EBI]
GO:0016444        [VIEW IN EMBL-EBI]
GO:0016445        [VIEW IN EMBL-EBI]
GO:0016447        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016896        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019724        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030097        [VIEW IN EMBL-EBI]
GO:0030145        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031125        [VIEW IN EMBL-EBI]
GO:0031126        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034472        [VIEW IN EMBL-EBI]
GO:0034475        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0035166        [VIEW IN EMBL-EBI]
GO:0035167        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0042113        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043144        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043633        [VIEW IN EMBL-EBI]
GO:0043634        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045006        [VIEW IN EMBL-EBI]
GO:0045190        [VIEW IN EMBL-EBI]
GO:0045191        [VIEW IN EMBL-EBI]
GO:0045321        [VIEW IN EMBL-EBI]
GO:0045830        [VIEW IN EMBL-EBI]
GO:0045911        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046649        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048534        [VIEW IN EMBL-EBI]
GO:0048542        [VIEW IN EMBL-EBI]
GO:0048569        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048732        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050864        [VIEW IN EMBL-EBI]
GO:0050865        [VIEW IN EMBL-EBI]
GO:0050867        [VIEW IN EMBL-EBI]
GO:0050871        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051249        [VIEW IN EMBL-EBI]
GO:0051251        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0070481        [VIEW IN EMBL-EBI]
GO:0070651        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071025        [VIEW IN EMBL-EBI]
GO:0071027        [VIEW IN EMBL-EBI]
GO:0071028        [VIEW IN EMBL-EBI]
GO:0071029        [VIEW IN EMBL-EBI]
GO:0071031        [VIEW IN EMBL-EBI]
GO:0071033        [VIEW IN EMBL-EBI]
GO:0071034        [VIEW IN EMBL-EBI]
GO:0071035        [VIEW IN EMBL-EBI]
GO:0071038        [VIEW IN EMBL-EBI]
GO:0071042        [VIEW IN EMBL-EBI]
GO:0071043        [VIEW IN EMBL-EBI]
GO:0071046        [VIEW IN EMBL-EBI]
GO:0071047        [VIEW IN EMBL-EBI]
GO:0071049        [VIEW IN EMBL-EBI]
GO:0071051        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1905354        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCTTGGAACAGGTAGGTGCTCTGCTTTATGTATGAGATGTGAAGGCAAATCCTGGAAAGTAATGCTGAGCTCACCAACATGTCCAGTTCTTGAGGCACTTGGCAAGAAGCTCTCCTTTGAGATAGCAGTTGGCTTAAATGGCCGTGTTTGGGTGAAAGCTGATTCTCCATCAACAGTTATTATTGTTGTCAATGCAATTATCAAGTCGGAGTCTTTAAGTGGGGCACAGCAGAAAATTATGGCAGAGAAATTACTTCAGAAAATTCAGAATGATTAA
Protein:  
MLLGTGRCSALCMRCEGKSWKVMLSSPTCPVLEALGKKLSFEIAVGLNGRVWVKADSPSTVIIVVNAIIKSESLSGAQQKIMAEKLLQKIQND